PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.5G036900.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 331aa    MW: 36678.2 Da    PI: 7.7986
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.5G036900.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.9e-104486345
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                        + k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Sevir.5G036900.3.p 44 DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 86
                        56889*************************9877777766555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-83689No hitNo description
SMARTSM003384.2E-842105IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4384488IPR004827Basic-leucine zipper domain
PfamPF001703.0E-74586IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.31E-74689No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
PfamPF141447.6E-34128203IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MADVSPRTET STDDTDDNHG LEPGPGALVA ASDSSDRSKD KHEDQKTLRR LAQNREAARK  60
SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGIFISSSV DQSHSMSGNG ALAFDMEYAR  120
WLEEHNRQIS ELRAGVTAHA SDSDLRSVVD KIMSHYDEIF RLKGNAAKAD VFHVLSGMWK  180
TPAERCFLWL GGFRPSEVLK LLSTQLEPLT EQQLSGIGNL QQSSQQAEDA LSQGMEALQQ  240
SLAETLAGSL SSSGSTGNVA NYMGQMAMAM GKLGTLENFL RQADNLRLQT LQQMQRILTT  300
RQAARALLVI SDYSSRLRAL SSLWLARPKE *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0361370.0BT036137.1 Zea mays full-length cDNA clone ZM_BFb0097M11 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012701959.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
RefseqXP_012701960.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
RefseqXP_012701961.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
SwissprotP239230.0HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLK3XJX20.0K3XJX2_SETIT; Uncharacterized protein
STRINGSi002192m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-146TGACG motif-binding factor 6